sanitize_sequences_vector() is an alias for sanitise_sequences_vector() - see aliases.
Takes a character vector of sequences, and removes any
non-ACGTU characters (case insensitive).
Usage
sanitise_sequences_vector(sequences, warn_on_removal = TRUE)
Arguments
- sequences
character vector. A character vector, e.g. c("ACGTA 5%h", "uXuG", "UcA67UcT"), from which any non-ACGTU characters will be removed.
- warn_on_removal
logical. Whether a warning should be shown when characters are removed. Default: TRUE.
Examples
sanitise_sequences_vector(c("ACGTA 5%h", "uXuG", "UcA67UcT"))
#> Warning: Invalid sequence characters removed: ' 5%hX67'
#> [1] "ACGTA" "uuG" "UcAUcT"
sanitise_sequences_vector(c("ACGTA 5%h", "uXuG", "UcA67UcT"), warn_on_removal = FALSE)
#> [1] "ACGTA" "uuG" "UcAUcT"
